Help and Tutorials

Tutorials for working with SoyBase (classic)

Genetic maps

• How to zoom into a region on the genetic map
• How to flip genetic maps to resolve corresponding marker positions
• Turning QTL classes off/on
• Removing and adding genetic maps
• How to quickly bring up a genetic or sequence map at SoyBase
• How do I find markers on a genetic map that are not visible
• How do I compare the genetic marker order to the sequence marker order

Searching

• How to do a quick BLAST against the soybean genome sequence
• Advanced BLAST analysis at SoyBase
• How to perform a quick search of SoyBase
• How to perform a SoyCyc quick search
• How to quickly get a list of all loci at SoyBase
• How do I get a list of all QTL in SoyBase
• How to search the Fast Neutron Mutant collection using a trait value
• Explanation of a Fast Neutron search report

Tutorials for working with SoyBase (new)

Other tools

• How to use the GCViT tool

Genome browsers

• How to move tracks in the SoyBase sequence viewer
• How to find information on tracks in the SoyBase sequence viewer
• Modifying tracks on the SoyBase sequence viewer
• Zooming into a region on the SoyBase sequence map
• How to visualize the approximate genetic position of a gene call on the genetic map
• Using the expression explorer to identify candidate genes of a GWAS QTL

Other videos on soybean

Growth and development

• Soybean Full Seed (R6) Growth Stage
• Soybean Stages, Development, and Management
• Understanding Soybean Emergence
• Soybean Emergence and Germination Common Issues
• Soybean Yellowing at V2 growth
• R5 Soybean Hail Damage
• R4 Soybean Hail Damage
• Later Season Soybean Growth Stages
• Potassium Deficiency in Soybean
• Potassium Deficient Corn and Soybean During Drought
• Determining Soybean Growth Stages - Tennessee Soybeans
• Early Drought Stress on Timely Planted Soybean
• Row spacing effect on yield
• Planting date and water stress effect on soybean

Pests

• Scouting Soybean Aphids in Wisconsin
• Soybean Aphid Natural Enemies
• Soybean Aphid Speed Scouting -- How To
• When to Speed Scout for soybean aphids
• Spider Mites in Soybean
• Soybean Insect Pest Management - Japanese Beetle and Soybean Aphid
• Soybean Cyst Nematode Identification and Management
• Soybean Cyst Nematode Fertilization
• Japanese beetle management in corn and soybean
• Soybean Cyst Nematode infestation management
• Scouting for Soybean Cyst Nematode Infestation
• Sampling soil for Soybean Cyst Nematode Infestation

Diseases

• Identifying Common Soybean Diseases
• Sudden death syndrome of soybean
• White Mold in Soybean
• Soybean Leaf Diseases
• Uncovering the root of soybean cyst nematode resistance
• Soybean Vein Necrosis Virus Research at IPFW
• Soybean Vein Necrosis Virus
• Soybean Vein Necrosis Disease (SVND)
• Soybean rust monitoring cuts SC farm losses
• Soybean Diseases Management and Fungicide Application Recommendations
• Soybean Charcoal Rot in Northern soybean

Field methods

• Estimating Soybean Yields - Simplified
• How to Take a Soybean Leaf Sample
• How to pollenate soybean
• How to use a two row harvester